List of Database Records  (records : )

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Database maintenance site: National Research Institute of Brewing
Organism(s) covered: Saccharomyces cerevisiae Kyokai no. 7 | Saccharomyces cerevisiae S288c
Description: SYGD contains the genome sequence of sake yeast strain, Kyokai no. 7 (K7). Users can search and browse the sequence and annotation information of the individual genes. It also p... Show Details...
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Database maintenance site: Iowa State University
Organism(s) covered: Sus scrofa
Description: Pig Genome Database (PGD) is a central pig genome information hub to support the community activities. The key functions of PDG include pig gene pages (a centralized gene search... Show Details...
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Database maintenance site: Simon Fraser University
Organism(s) covered: Burkholderia
Description: The Burkholderia Genome Database provides a resource for cystic fibrosis research community to perform multi-genome comparisons of strains within the Burkholderia cepacia comple... Show Details...
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Database maintenance site: Kazusa DNA Research Institute
Organism(s) covered: Chrysanthemum morifolium
Description: Mum GARDEN is a database for cultivated chrysanthemum genomics. Each entry contains sequences (genome, CDS, PEP), BLAST results from NR and Araport11, and InterProScan data. Add... Show Details...
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Database maintenance site: Kazusa DNA Research Institute
Organism(s) covered: Eucalyptus camaldulensis
Description: Eucalyptus camaldulensis Genome Database contains genetic information of E. camaldulensis which was investigated by sequencing the genome and the cDNA using a combination of the... Show Details...
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Database maintenance site: Kazusa DNA Research Institute
Organism(s) covered: Zoysia japonica | Zoysia matrella | Zoysia pacifica
Description: Zoysia Genome Database is a database for zoysiagrasses genomics. It contains sequencing and comparative analyses data about the genomes of zoysiagrasses; Z. japonica, Z. matrell... Show Details...
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Database maintenance site: Kazusa DNA Research Institute
Organism(s) covered: Ipomoea batatas
Description: Sweetpotato GARDEN is a database for Sweetpotato (Ipomoea batatas) genomics. Each entry contains nucleotide sequence, BLAST search data from other databases such as TAIR and NR.... Show Details...
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Database maintenance site: Kazusa DNA Research Institute
Organism(s) covered: Prunus avium | Prunus yedoensis
Description: DBcherry is a database for cherry genomics. It contains information about Sweet cherry (Prunus avium), Satonishiki;1) whole genome sequences with gene annotation2) SNP, SSR, and... Show Details...
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Database maintenance site: Kazusa DNA Research Institute
Organism(s) covered: Solanum melongena L.
Description: Eggplant Genome DataBase is a database about an eggplant (Solanum melongena L.)whole-genome dataset. Each entry contains nucleotide sequence, translated sequence, BLAST search d... Show Details...
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Database maintenance site: MISTEA / LEPSE, INRA (French National Institute for Agricultural Research)
Organism(s) covered: Viridiplantae
Description: PHIS is an ontology-driven open source information system designed for plant phenomics. It allows assembling a number of datasets from different installations in controlled and ... Show Details...
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Database maintenance site: National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Description: DruMAP is a database about drug metabolism and pharmacokinetics (PK) analysis. It consists of compound report database, PK search and PK prediction sites. Each compound report i... Show Details...
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Database maintenance site: University of Georgia, George Washington University
Organism(s) covered: All
Description: GlyGen is an integrated database for carbohydrate and glycoconjugate related data. It retrieves information from multiple international data sources and integrates and harmonize... Show Details...
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Database maintenance site: Kazusa DNA Research Institute
Organism(s) covered: Vertebrata
Description: Plant GARDEN is a portal site that curates genome and marker information of various plant species. It contains information about assembled genomes, markers (SSR, CAPS, SCAR), bi... Show Details...
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Database maintenance site: J. Craig Venter Institute, Texas Advanced Computing Center, The University of Texas at Austin, University of Cambridge
Organism(s) covered: Arabidopsis thaliana
Description: Araport is an open-access online community resource for Arabidopsis research. It hosts the Araport11, updated Arabidopsis genome annotation from TAIR10. Araport offers two core ... Show Details...
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Database maintenance site: Tokyo Women's Medical University
Organism(s) covered: Caenorhabditis elegans
Description: NBRP C. elegans is a National Bioresource Project for the experimental animal "Nematode C. elegans". Tokyo Women's Medical University is the core facility to collect, store and ... Show Details...
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Database maintenance site: Tohoku University Graduate School of Information Sciences
Organism(s) covered:
Description: NLDB is a database of automatically collected and predicted 3D protein-ligand interactions in the enzymatic reactions of metabolic pathways registered in KEGG. NLDB provides th... Show Details...
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Database maintenance site: Research Organization of Information and Systems National Institute of Genetics
Organism(s) covered: Homo sapiens | Mus musculus | Rattus norvegicus
Description: hGTOP is a database of human, mouse, rat proteins identified in the genome, focuses on a structural annotation. The original GTOP (https://integbio.jp/dbcatalog/en/record/nbdc00... Show Details...
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Database maintenance site: Waseda University
Organism(s) covered:
Description: VaProS is a new data cloud for Structural Life Science, integrates different databases/tools to provides protein/genome information for researchers. VaProS accepts keywords, DNA... Show Details...
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Database maintenance site: Iwate Tohoku Medical Megabank Organization
Organism(s) covered: Homo sapiens
Description: iMETHYL is an integrative multi-omics (methylome, transcriptome, and genome) database. These data were obtained from WGBS, WGS, and RNA-Seq for CD4+ T-lymphocytes, monocytes, an... Show Details...
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Database maintenance site: The University of Tokyo Graduate School of Science The Misaki Marine Biological Station
Organism(s) covered: Anneissia japonica
Description: Misaki Marine Biological Station, University of Tokyo, participates in National Bio Resource Project for collection, maintenance and distribution of living juveniles and adults,... Show Details...
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Database maintenance site: RIKEN Center for Brain Science
Organism(s) covered: Callithrix jacchus
Description: The Marmoset Gene Atlas provides a whole brain, high-resolution gene expression atlas in the common marmoset (Callithrix jacchus). It provides in situ hybridization (ISH) data ... Show Details...
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Database maintenance site: RIKEN Center for Brain Science, Brain/MINDS Database Council
Organism(s) covered: Callithrix jacchus | Homo sapiens
Description: The Brain/MINDS Data Portal shares the data being produced in the Brain/MINDS project. The common marmoset (Callithrix jacchus) 3D reference brain atlas is available for downloa... Show Details...
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Database maintenance site: Tokai University School of Medicine
Organism(s) covered: cellular organisms | Viroids | Viruses
Description: GenomeSync is a large database of genome sequences mostly from NCBI Assembly. Once GenomeSync is downloaded using Syncthing software, a local copy of the database is continuousl... Show Details...
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Database maintenance site: National Institute of Infectious Diseases
Organism(s) covered: Escherichia coli | Klebsiella pneumoniae | Enterobacter cloacae | Salmonella | Klebsiella oxytoca | ...
Description: GenEpid-J is an integrated database of pathogen genomics and epidemiology focused on plasmids involving in the antimicrobial resistance. Show Details...
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Database maintenance site: Naturalis Biodiversity Center
Organism(s) covered: all
Description: Linnaeus NG is a data management system for species information developed and maintained by Naturalis Biodiversity Center. It contains a wide variety of information about taxa. ... Show Details...
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Database maintenance site: GlyCosmos Portal
Organism(s) covered:
Description: GlyCosmos Portal is a portal site of glycoscience-related web resources, which includes databases and repositories for glycogenes, glycoconjugates such as glycoproteins and glyc... Show Details...
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Database maintenance site: Niigata University Faculty of Engineering Department of Information Engineering
Organism(s) covered: Bacteria | Archaea | Viruses
Description: tRNADB-CE is a database of manually curated tRNA gene information. It contains tRNA sequences that have been evaluated experimentally after initial identification by computation... Show Details...
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Database maintenance site: Boyce Thompson Institute for Plant Research
Organism(s) covered: Solanum lycopersicum | Solanum pimpinellifolium | Solanum tuberosum | Solanum phureja | Nicotiana | ...
Description: SGN is a database of genome and phenotype data for species in the Solanaceae and their close relatives. It provides genome maps and sequences, QTLs, RNA-seq, and microarray data... Show Details...
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Database maintenance site: Department of Molecular Genetics, Brain Research Institute, Niigata University
Organism(s) covered: Homo sapiens
Description: JFADdb contains information about mutations in genes linked to dominantly inherited Alzheimer's disease (APP, PSEN1, and PSEN2) as well as FTDP-17 (MAPT and GRN) in the Japanese... Show Details...
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Database maintenance site: Osaka University
Organism(s) covered: Homo sapiens
Description: The site introduces evidence-based information on how to consider the relative advantages and disadvantages of complementary and alternative medicine including folk therapy. The... Show Details...
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Database maintenance site: ATCC Standards Development Organisation, CellBank Australia, Genetica DNA Laboratories, Japanese Collection of Research Bioresources Cell Bank (JCRB Cell Bank), Riken Resource Centre, Swiss Institute of Bioinformatics (SIB), UK Global Biological Standards Institute (GBSI)
Organism(s) covered: All
Description: This database lists cell lines that are currently known to be cross-contaminated or otherwise misidentified. Show Details...
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Database maintenance site: Department of Biochemistry and Biomedical Sciences, McMaster Universit
Organism(s) covered: Bacteria
Description: A bioinformatic database of antimicrobial resistance genes, their products and associated phenotypes. Show Details...
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Database maintenance site: Australian Research Council, University of Queensland
Organism(s) covered: Brassica
Description: This site hosts Brassica genome databases. Show Details...
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Database maintenance site: Australian Research Council, Edwards Group, University of Western Australia, University of Queensland
Organism(s) covered: Triticum
Description: An integrated database and portal for wheat genome information. Show Details...
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Database maintenance site:
Organism(s) covered: Caenorhabditis elegans
Description: Whole-genome sequence data, variant calls, and annotations of natural genetic variation in C. elegans species. Show Details...
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Database maintenance site:
Organism(s) covered: Homo sapiens
Description: European Organisation for Research and Treatment of Cancer database of clinical trials. Show Details...
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Database maintenance site: National Institutes of Health
Organism(s) covered: All
Description: The Cancer gene expression and microarray data of the National Cancer Institute Show Details...
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Database maintenance site: Institute of Human Genetics (IGH)
Organism(s) covered: Homo sapiens
Description: A registry of Hereditary Auto-inflammatory Disorder Mutations. Show Details...
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Database maintenance site: Institut Pasteur
Organism(s) covered: Bacteria
Description: GenoList is an integrated environment for comparative exploration of microbial genomes. The current release integrates genome data for over 700 species (Genome Reviews). The que... Show Details...
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Database maintenance site: Indian Institute of Science
Organism(s) covered: All
Description: A web based database of Transmembrane Helices in Genome Sequences. Show Details...
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Database maintenance site: Bioinformatics Portal Site (BPS)
Organism(s) covered: Fungi
Description: The CFGP (Comparative Fungal Genomics Platform) was designed for comparative genomics projects with diverse fungal genomes. Show Details...
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Database maintenance site: Baylor College of Medicine
Organism(s) covered: All
Description: Relative evolutionary importance of amino acids within a protein sequence. Show Details...
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Database maintenance site: Institute of Molecular Medicine (IMM), Peking University
Organism(s) covered: Rhesus macaques
Description: A comprehensive online knowledgebase for the monkey research community. Show Details...
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Database maintenance site: University of Washington
Organism(s) covered: Brugia malayi | Leishmania major | Schistosoma mansoni | Toxoplasma gondii
Description: Identification and ranking of targets against neglected tropical diseases Show Details...
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Database maintenance site: Structural Bioinformatics Group, Institute of Molecular Biology and Bioinformatics, Charité-University Medicine Berlin
Organism(s) covered: All
Description: Drug-related information: medical indications, adverse drug effects, drug metabolism and Gene Ontology terms of the target proteins. Show Details...
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Database maintenance site: Dana-Farber Cancer Institute
Organism(s) covered: Homo sapiens | Mus musculus | Rattus norvegicus
Description: Comparison system for cancer stem cell analysis Show Details...
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Database maintenance site: Institute of Biomedical Sciences (IBMS), Academia Sinica
Organism(s) covered: Homo sapiens
Description: Integrated Genomic Database of Non-Small Cell Lung Cancer. Show Details...
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Database maintenance site: Myongji University
Organism(s) covered: Canis familiaris | Danio rerio | Homo sapiens | Mus musculus | Rattus norvegicus
Description: Death Domain Database is a manually curated database of protein-protein interactions for Death Domain Superfamily. Show Details...
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Database maintenance site: Center for Bioinformatics (CBI), Peking University
Organism(s) covered: Homo sapiens
Description: Autism genetics KnowledgeBase, an evidence-based knowledgebase of autism genetics. Show Details...
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Database maintenance site: Stanford University School of Medicine
Organism(s) covered: Homo sapiens
Description: Oligonucleotides for targeted resequencing of the human genome Show Details...