MSDB: MicroSatellite DataBase
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| Database maintenance site: | CCMB (CSIR-Centre for Cellular & Molecular Biology) |
| Country/Region: | India |
| Database description: | MSDB is a database of simple sequence repeats (SSRs), also known as microsatellites. Each entry contains chromosome No., repeat class, repeat length, related gene name, annotations (exon, intron, intergenic or genic), and distance from TSS, etc. It allows users to browse using species list or species names. The data have been regularly updated by using UCSC, RefSeq and GenBank databases. |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, Organism |
| Tag - Information type: | Sequence |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://data.ccmb.res.in/msdb/ |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | https://data.ccmb.res.in/msdb/ |
| Contact information of database: | https://data.ccmb.res.in/msdb/ |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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SSRome Integrative and Conjugative Elements in Bacteria Strawberry GARDEN Aspergillus Genomes Comparative Fungal Genomics Platform Legionella pneumophila genome database 16S RNA sequence set for metagenomic analysis The Human OligoGenome Resource: A Database for Customized Targeted Resequencing Covering the Human Genome CAGm Mouse Genome Databases |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2022-04-28 |
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Last update date of this record:
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2022-04-28 |
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Record license:
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Creative Commons CC0 license |