TerrestrialMetagenomeDB
 ID: | |
| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | Helmholz-Zentrum for Environmental Research |
| Country/Region: | Germany |
| Database description: | TerrestrialMetagenomeDB is a repository of curated metadata for terrestrial metagenomes. Data are collected from MG-RAST and the Sequence Read Archive (SRA), the two main metagenome repositories, and includes two sections; “Complete dataset” holds the full content of the databases' current version. On the other hand, the “Interactive map” provides a more intuitive way of selecting metagenomes directly from the world map, although being limited by the metagenomes with a pair of valid geographic coordinates available. |
| Organism(s) covered: | , |
| Tag - Target: | Genome/Gene, Organism |
| Tag - Information type: | Sequence, Environment |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://webapp.ufz.de/tmdb/session/c2744a2559c3386a51e8f517a401f619/download/download_explorerData?w= |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | https://www.youtube.com/playlist?list=PLmPZiWwqlBpDQWRFduzh9tBLmZqVb4mQH |
| Contact information of database: | https://webapp.ufz.de/tmdb/ |
| Link(s) to API / SPARQL endpoint | https://github.com/tmdb-team/tmdb |
|
Link to LSDB Archive:
|
- |
|
Link to MEDALS Database list:
|
- |
|
Link to TogoTV:
|
- |
|
Link to FAIRsharing:
|
- |
|
Similar databases:
|
gcMeta KEGG MGENES JaLTER Data Catalog Search Earthref.org Microbiome Datahub MGnify KEGG Metagenomes JFODB |
|
Record maintainer
|
Integbio Database Catalog |
|
Record source:
|
|
|
Date of creation of this record:
|
2022-03-30 |
|
Last update date of this record:
|
2022-03-30 |
|
Record license:
|
Creative Commons CC0 license |