SNP2APA
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| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | College of informatics, HZAU |
| Country/Region: | China |
| Database description: | SNP2APA is a database for exploring the effects of single nucleotide polymorphisms (SNPs) on alternative polyadenylation (APA). SNP2APA allows users to : Browse or search cis-apaQTLs and trans-apaQTLs across different cancer types; Browse or search apaQTLs associated with patient overall survival across different cancer types; Browse or search apaQTLs in GWAS linkage disequilibrium (LD) regions; Predict the effects of SNP on PAS by submitting wild sequence and mutant sequence; Download figures and all apaQTL results. |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, Genetic variation, Health/Disease |
| Tag - Information type: | Sequence, Expression, Localization, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | http://gong_lab.hzau.edu.cn/SNP2APA#!/download |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | http://gong_lab.hzau.edu.cn/SNP2APA#!/help |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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HaploReg SEdb Tree Shrew Database RNA Binding Protein Variant Database EnhancerAtlas 2.0 Pancan-meQTL DistiLD Database: Diseases and Traits in Linkage Disequilibrium Blocks DBcherry Chickpea Portal PolyDoms |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2022-03-30 |
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Last update date of this record:
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2022-03-30 |
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Record license:
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Creative Commons CC0 license |