DNAproDB
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| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | USC (University of Southern California) |
| Country/Region: | United States |
| Database description: | DNAproDB is a database for DNA-protein complexes. The site consists of a database, structure processing pipeline and web-based visualization tool. The database contains structural and biochemical features of DNA-protein complexes from the Protein Data Bank (3D structure, residue contact map, Helical contact map, protein chain information, DNA-protein interfaces, etc.). Users can search structures based on structural and bio-physical features of the protein, DNA, DNA-protein interactions in the structure. |
| Organism(s) covered: | |
| Tag - Target: | DNA, Protein |
| Tag - Information type: | 3D structure, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://dnaprodb.usc.edu/download.html |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | https://dnaprodb.usc.edu/documentation.html#using-data |
| Link(s) to "How to use": | https://dnaprodb.usc.edu/documentation.html#searching |
| Contact information of database: | https://dnaprodb.usc.edu/cgi-bin/contact |
| Link(s) to API / SPARQL endpoint | https://dnaprodb.usc.edu/documentation.html#search_api |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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- |
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Link to TogoTV:
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- |
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Link to FAIRsharing:
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- |
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Similar databases:
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Homeodomain Resource ProNuc Protein Protein Interaction Inhibition Database PiSITE Proteopedia Biomolecules Gallery 3D interacting domains FlyFactorSurvey non-B DB Structure |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2022-04-13 |
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Last update date of this record:
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2022-04-13 |
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Record license:
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Creative Commons CC0 license |