MetaboBank
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| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | Bioinformation and DDBJ Center, National Institute of Genetics, Research Organization of Information and Systems (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | MetaboBank is an integrated metabolome data repository. It contains various metabolome data such as experimental raw data from mass spectrometry (MS), NMR analysis, imaging MS and those metadata. It allows to search using methods, data format, or organism. Metadata are described in the MAGE-TAB format, which is standard in functional genomics (GEA and EBI ArrayExpress) and proteomics (SDRF-Proteomics). It also compatible with ISA-TAB used by the MetaboLights at EBI. Each data is associated by Resource Description Framework (RDF), which enable to further expansion. |
| Organism(s) covered: | - |
| Tag - Target: | Metabolite |
| Tag - Information type: | Bibliography/Documents, Repository |
| Reference(s) - PubMed ID/DOI: | - |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://ddbj.nig.ac.jp/public/metabobank/project/ |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | https://www.ddbj.nig.ac.jp/metabobank/contact-e.html |
| Link(s) to "How to use": | - |
| Contact information of database: | https://www.ddbj.nig.ac.jp/contact-ddbj-e.html |
| Link(s) to API / SPARQL endpoint | https://mb2.ddbj.nig.ac.jp |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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Metabolomics Workbench KNApSAcK Biomarker Physiome Model Repository Metabolonote Experimental data repository for KInetic MOdels of biological SYStems NARCIS MetaNetX IntAct NCI Center for Strategic Scientific Initiatives Data Coordinating Center MS-MS Fragment Viewer |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2022-09-14 |
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Last update date of this record:
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2023-02-20 |
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Record license:
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Creative Commons CC0 license |