HACER: Human ACtive Enhancer to interpret Regulatory variants
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| Database maintenance site: | Vanderbilt University Medical Center |
| Country/Region: | United States |
| Database description: | HACER is a database of human active enhancer to interpret regulatory variants, which includes active, transcribed enhancers derived from GRO-seq, PRO-seq and CAGE data. It provides not only information of cell-type-specific enhancers but also information of transcriptional regulatory network involved in enhancers. Each entry contains basic information of the enhancer, information of transcription factors bound to the enhancer, target genes, and GWAS SNPs and eQTLs in the enhancer. |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, DNA, Genetic variation, Cell/Organelle, Health/Disease |
| Tag - Information type: | Sequence, Expression, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | http://bioinfo.vanderbilt.edu/AE/HACER/download.html |
| Link(s) to Metadata of downloadable data: | http://bioinfo.vanderbilt.edu/AE/HACER/download/format.txt |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | http://bioinfo.vanderbilt.edu/AE/HACER/manual.html |
| Contact information of database: | http://bioinfo.vanderbilt.edu/AE/HACER/contact.html |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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OncoBase ReMap HmtVar HaploReg Beijing Genomics Institute Rice Information System RNA Binding Protein Variant Database FlyFactorSurvey Genome Network Platform SNP2APA Factorbook |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2019-11-05 |
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Last update date of this record:
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2019-11-05 |
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Record license:
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Creative Commons CC0 license |