Inactive
(Over 14 days)
(Over 14 days)
Genome Network Platform
 ID: | |
| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | National Institute of Genetics (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | Genome network platform is an integrated database and web viewers for the Genome Network Project. It integrates experimental data, which generated from the project in association with the public databases, relating to the following information: 1) transcription starting position of human genes in the human genome, 2) conjunction to control region on transcriptional factors and the human genome, 3) protein-protein interaction with a central focus on transcription factors. This database provides the following functions: a) 'Genome Explorer' for annotation of landmarks (genes, transcription start sites, etc.) aligned in accordance with their genome locations. b) 'PPI Network' for a graphical view of protein-protein interaction (PPI) network from the experimental data generated under the project and the public datasets. c) 'Expression Profile' to cluster genes by expression pattern and display the result with heatmap, and for genes which have relation of coregulation and anti-coregulation. d) 'Comparison Viewer' for comparison the genomic region of Human/Mouse. Users are able to obtain the distributed clones. |
| Organism(s) covered: | , |
| Tag - Target: | Genome/Gene, Protein |
| Tag - Information type: | Sequence, Expression, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | - |
| Language(s): | Japanese, English |
| Operational status: | Inactive |
| Link(s) to Downloadable data: | http://genomenetwork.nig.ac.jp/download/dataset_e.html |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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YPA Saccharomyces cerevisiae Transcription Factor Database CollecTF Plant Transcription Factor Database FlyFactorSurvey PODC EpoDB PAZAR CREB Target Gene Database ChIP-Atlas |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2019-03-11 |
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Record license:
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Creative Commons CC0 license |