ALCOdb: Algae Gene Coexpression Database
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| Database maintenance site: | Tohoku University Graduate School of Information Sciences (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | ALCOdb is a gene coexpression database for microalgae. It provides gene coexpression data about two unicellular microalgae: a green alga Chlamydomonas reinhardtii and a red alga Cyanidioschyzon merolae. Original data were obtained from public databases such as Sequence Read Archive (http://integbio.jp/dbcatalog/record/nbdc01098) or Gene Expression Omnibus (http://integbio.jp/dbcatalog/record/nbdc00080), and analyzed. The information of orthologous genes in Arabidopsis thaliana and the other microalgae are provided, and users can check the coexpression genes in those organisms. |
| Organism(s) covered: | , |
| Tag - Target: | Genome/Gene |
| Tag - Information type: | Expression, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | http://alcodb.jp/coexpression/download |
| Link(s) to Metadata of downloadable data: | http://alcodb.jp/coexpression/download |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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PODC MSigDB CREEDS Open Regulatory Annotation ATTED-II ED-Genes FlyMine GENIES Rubber Genome & Transcriptome Database Gemma |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2018-12-18 |
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Last update date of this record:
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2018-12-17 |
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Record license:
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Creative Commons CC0 license |