SwissRegulon
 ID: | |
| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | SIB (Swiss Institute of Bioinformatics) |
| Country/Region: | Switzerland |
| Database description: | The Swissregulon Database contains genome-wide annotations of regulatory sites. The predictions are based on Bayesian probabilistic analysis of a combination of input information including i) Experimentally determined binding sites reported in the literature, ii) Known sequence-specificities of transcription factors, iii) ChIP-chip and ChIP-seq data, iiii) Alignments of orthologous non-coding regions. |
| Organism(s) covered: | , , , , , , , , , , , , , , , , , , , |
| Tag - Target: | Genome/Gene, Epigenetics |
| Tag - Information type: | Sequence, Expression, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://swissregulon.unibas.ch/sr/downloads |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | https://swissregulon.unibas.ch/sr/contact |
| Link(s) to API / SPARQL endpoint | - |
|
Link to LSDB Archive:
|
- |
|
Link to MEDALS Database list:
|
- |
|
Link to TogoTV:
|
- |
|
Link to FAIRsharing:
|
https://fairsharing.org/biodbcore-000879 |
|
Similar databases:
|
Factorbook MethMotif Annotated regulatory Binding Sites from Orthologous Promoters DAnCER EWAS Atlas Plant Transcription Factor Database YPA NGS-QC Pancreas Expression Database CollecTF |
|
Record maintainer
|
See the corresponding part in the FAIRsharing record. |
|
Record source:
|
 (2021-05-24)
|
|
Date of creation of this record:
|
2021-05-26 |
|
Last update date of this record:
|
2023-02-20 |
|
Record license:
|
Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |