Closed
TOT-DB: The Theileria orientalis Genome Annotation Database
 ID: | |
| Database name: | |
| Alternative name: | |
| URL: | |
| Database maintenance site: | Hokkaido University Research Center for Zoonosis Control (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | TOT-DB is a database covering the whole genome of the parasitic intracellular protozoan, Theileria orientalis, sequenced with a whole genome shotgun sequence method, combined with manual gap closing followed by automated/manual annotation. Using G-integra genome browser, users are able to browse physical maps of the T. orientalis genome and their gene structures. This database is available for comparative genome analysis between highly pathogenic species, T. parva or T. annulata, and non-transforming species, T. orientalis. It also allows searches for homology by BLAST. The genome sequences and gene annotation of T. orientalis is downloadable. |
| Organism(s) covered: | , , |
| Tag - Target: | Genome/Gene |
| Tag - Information type: | Sequence |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Closed |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
|
Link to LSDB Archive:
|
- |
|
Link to MEDALS Database list:
|
http://medals.jp/elist/detail/189.html |
|
Link to TogoTV:
|
- |
|
Link to FAIRsharing:
|
- |
|
Similar databases:
|
HGD GENCODE DAIZUbase Medaka Methylome Browser KAIKObase SoybeanTFDB EnsemblProtists BGDB EnsemblPlants EnsemblFungi |
|
Record maintainer
|
Integbio Database Catalog |
|
Record source:
|
|
|
Date of creation of this record:
|
2013-07-29 |
|
Last update date of this record:
|
2019-05-16 |
|
Record license:
|
Creative Commons CC0 license |
