Database Record

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Inactive
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MAPPER-2:  mapperdb

info ID: NBDC02058
info Database name: MAPPER-2
info Alternative name: mapperdb
info URL: 
info Database maintenance site: University of Florida
info Country/Region: United States
info Database description: This resource provides information primarily on the upstream non-coding sequence data of genes in 3 genomes which gives insight into the transcription factors binding sites (TFBSs). For each transcript, the region scanned extends from 10,000bp upstream of the transcript start to 50bp downstream of the coding sequence start. Therefore, the database contains putative binding sites in the gene promoter and in the initial introns and non-coding exons.
Information displayed for each putative binding site includes the transcription factor name, its position (absolute on the chromosome, or relative to the gene), the score of the prediction, and the region of the gene the site belongs to. If the selected gene has homologs in any of the other two organisms, the program optionally displays the putative TFBSs in the homologs.
info Organism(s) covered: Drosophila melanogaster (), Homo sapiens (), Mus musculus ()
info Tag - Target: Genome/Gene, Protein
info Tag - Information type: Interaction/Pathway
info Reference(s) - PubMed ID/DOI: 
PubMed ID:
15799782
DOI:
-
PubMed ID:
15608292
DOI:
-
info Language(s): English
info Operational status: Inactive
info Link(s) to Downloadable data: -
info Link(s) to Metadata of downloadable data: -
info Link(s) to Terms of use: -
info Link(s) to "How to use": -
info Contact information of database: -
info Link(s) to API / SPARQL endpoint -