Inactive
(Over 14 days)
(Over 14 days)
ASAP II: the Alternative Splicing Annotation Project II
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| Database maintenance site: | University of California Los Angeles |
| Country/Region: | United States |
| Database description: | ASAP II is a database of alternative splicing information coming from genomics and proteomics. It provides precise gene exon-intron structure, alternative splicing, tissue specificity of alternative splice forms, and protein isoform sequences resulting from alternative splicing. As for human, EST libraries are classified and included into tissue and cancer classification, and lists of tissue & cancer (normal) specific alternatively spliced genes are calculated. ASAP II can be easily integrated with pygr (the Python Graph Database Framework for Bioinformatics) and its powerful features such as graph query, multi-genome alignment query and etc. Furthermore, it can help biologists design probe sequences for distinguishing specific mRNA isoforms. This database can be searched by several different criteria such as gene symbol, gene name and ID (Unigene, GenBank etc.). |
| Organism(s) covered: | , , , , , , , , , , , , , |
| Tag - Target: | Genome/Gene |
| Tag - Information type: | Sequence, Classification |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Inactive |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Similar databases:
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Evola ECRbase Isobase PGF-DB RARTF Hoppsigen Genome Project of Symbiobacterium thermophilum PhylomeDB GreenPhylDB: A phylogenomic database for plant comparative genomics COGs |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2014-04-21 |
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Record license:
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Creative Commons CC0 license |