Noncoding RNA database
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| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | Poznan University |
| Country/Region: | Poland |
| Database description: | This database is a collection of information associated with the sequence and function of non-coding RNA. There are over 30,000 sequences spanning a total of 99 species from Bacteria, Archaea, and Eukaryota. Sequence information is obtained from GenBank, annotations are obtained from FANTOM3 (mouse) and H-invitational Integrated Database (humans), while the genome mapping information uses the UCSC genome browser. The sequences and annotations of small cytoplasmic RNAs from bacteria is obtained from the Rfam database. This database does not include microRNA, snoRNA, and housekeeping RNAs such as rRNA, tRNA, snRNA, and SPR RNA. |
| Organism(s) covered: | , , |
| Tag - Target: | RNA |
| Tag - Information type: | Sequence |
| Reference(s) - PubMed ID/DOI: | - |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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UCSC GenomeBrowser for Functional RNA miRBase snoRNABase worm UTRome 5S Ribosomal RNA Database tRNAdb Recount DB Plant snoRNA Database GtRNAdb The European ribosomal RNA Database |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2013-06-17 |
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Record license:
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Creative Commons CC0 license |