Translocatome
 ID: | |
| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | LINK-group |
| Country/Region: | Hungary |
| Database description: | Translocatome is a database that collects and characterises manually curated and predicted translocating proteins from human cells. The prediction is made by a gradient boosting based machine learning algorithm (XGBoost), using highly curated positive and negative learning sets. |
| Organism(s) covered: | |
| Tag - Target: | Protein |
| Tag - Information type: | Localization, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | http://translocatome.linkgroup.hu/download |
| Link(s) to Metadata of downloadable data: | http://translocatome.linkgroup.hu/download |
| Link(s) to Terms of use: | http://translocatome.linkgroup.hu/help/open-source |
| Link(s) to "How to use": | - |
| Contact information of database: | http://translocatome.linkgroup.hu/help/open-source |
| Link(s) to API / SPARQL endpoint | - |
|
Link to LSDB Archive:
|
- |
|
Link to MEDALS Database list:
|
- |
|
Link to TogoTV:
|
- |
|
Link to FAIRsharing:
|
https://fairsharing.org/FAIRsharing.FL1LNB |
|
Similar databases:
|
EffectiveDB CropPAL Compartmentalized Protein-Protein Interaction PhaSepDB PINT ProteomicsDB VirusMentha Interologous Interaction Database pdbBAM Molecular INTeraction Database |
|
Record maintainer
|
See the corresponding part in the FAIRsharing record. |
|
Record source:
|
 (2021-06-28)
|
|
Date of creation of this record:
|
2021-06-30 |
|
Last update date of this record:
|
2023-02-20 |
|
Record license:
|
Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |