piRTarBase: piRNA targeting sites
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| Database maintenance site: | Department of Electrical Engineering, National Cheng Kung University |
| Country/Region: | China |
| Database description: | piRTarBase is a database about PIWI-interacting RNAs (piRNAs) which are a class of small noncoding RNAs that guard animal genomes against mutation by silencing transposons. It provides both predicted and experimentally identified piRNA targeting sites in Caenorhabditis elegans and Caenorhabditis briggsae. User can search a list of piRNA targeting sites or mRNA targets by a gene or piRNA. The piRTarBase integrates published mRNA and small RNA sequencing data. |
| Organism(s) covered: | , |
| Tag - Target: | Genome/Gene, RNA |
| Tag - Information type: | Sequence, Expression, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | http://cosbi6.ee.ncku.edu.tw/piRTarBase/download/ |
| Link(s) to Metadata of downloadable data: | http://cosbi6.ee.ncku.edu.tw/piRTarBase/download/ |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | http://cosbi6.ee.ncku.edu.tw/piRTarBase/tutorial/ |
| Contact information of database: | http://cosbi6.ee.ncku.edu.tw/piRTarBase/contact/ |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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piRBase microRNA.org doRiNA siRecords AceView genes Plant snoRNA Database Database of small human non-coding RNAs BioXpress HEMM |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2020-01-21 |
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Last update date of this record:
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2020-01-21 |
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Record license:
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Creative Commons CC0 license |