EncoMPASS: Encyclopedia of Membrane Proteins Analyzed by Structure and Symmetry
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| Database maintenance site: | NINDS (National Institute of Neurological Disorders & Stroke) |
| Country/Region: | United States |
| Database description: | EncoMPASS is a database for relating integral membrane proteins from the points of view of their sequence, structure, and quaternary and internal symmetries. Analysis was done for all membrane-spanning PDB entries and separately for all membrane-spanning chains found therein in terms of the relationships between integral membrane proteins using structural and sequence similarity, and the symmetry of integral membrane proteins structures. It contains; 1) General information about the complete biological unit of each membrane protein structure. 2) A list of chains contained in the biological unit and their relationships to other structures in the database. 3) Raw output from two symmetry detection programs: CE-Symm and SymD. 4) Consensus results from processing with SymD and CE-Symm with default and customized parameters. |
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| Tag - Target: | Protein |
| Tag - Information type: | Sequence, 3D structure, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://encompass.ninds.nih.gov/downloads |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | https://encompass.ninds.nih.gov |
| Link(s) to API / SPARQL endpoint | - |
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Similar databases:
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MIPModDB: A Central Resource for the Superfamily of Major Intrinsic Proteins 3D interacting domains PreDom Bactibase: database dedicated to bacteriocins RESID Database of Protein Modifications Structure, Interfaces and Alignments for Protein-Protein Interactions Database BISC M-CSA Protein Protein Interaction Inhibition Database WCPDB |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2019-10-09 |
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Last update date of this record:
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2019-10-09 |
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Record license:
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Creative Commons CC0 license |