The Global Proteome Machine Database: gpmDB
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| Database maintenance site: | MCPSB (Manitoba Centre for Proteomics and Systems Biology) |
| Country/Region: | Canada |
| Database description: | The Global Proteome Machine Database (gpmDB holds the minimum amount of information necessary for common bioinformatics-related tasks (such as sequence assignment validation) rather than being a complete record of a proteomics experiment. It was also created to aid in the process of validating peptide MS/MS spectra as well as protein coverage patterns. Most of the data is held in a set of XML files: the database serves as an index to those files, allowing for rapid lookups and reduced database storage requirements. |
| Organism(s) covered: | |
| Tag - Target: | Protein |
| Tag - Information type: | Chemical structure, Method |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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https://fairsharing.org/10.25504/FAIRsharing.fhcmwq |
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Similar databases:
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ProTherm BSDB Proteome-pI : proteome isoelectric point database MetaboLights CiteAb MassBank EPA Comptox Chemicals Dashboard PEPTIDOME Golm Metabolome Database SABIO-RK Biochemical Reaction Kinetics Database |
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Record maintainer
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See the corresponding part in the FAIRsharing record. |
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Record source:
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 (2018-12-21)
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Date of creation of this record:
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2019-03-28 |
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Last update date of this record:
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2024-07-24 |
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Record license:
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Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |