Melonet DB
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| Alternative name: | - |
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| Database maintenance site: | University of Tsukuba Graduate School of Life and Environmental Sciences (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | Melonet DB is a database about whole gene expression in muskmelon (Cucumis melo L.). It contains expression patterns of whole gene in 30 different tissues of "Earl's favorite Harukei-3 (Harukei-3)" melon, and provides following tools: (1) Gene expression map viewer is designed to analyze tissue-specific gene expression pattern in 30 different tissues. (2) Coexpression viewer is designed to analyze coexpression relationship between genes. (3) Mutation analysis tools are aimed at to analyze whether nucleotide change(s) cause amino acid substitution, frame shift, or splicing variation within gene. (4) Sequence analysis tools are designed to analyze DNA sequence. Blast or "oligo DNA mapper" identify homologous genes or genomic positions, respectively, based on query sequence. (5) Primer design tools are designed to analyze primer sequence and find the best possible unique PCR primer pair based on target query sequence. |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, Organism |
| Tag - Information type: | Expression, Sequence, Localization |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://melonet-db.dna.affrc.go.jp/ap/dnl |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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TodoFirGene SAGD Silkworm, Bombyx mori, reference transcriptome data Tree Shrew Database AlliumTDB MitoGenesisDB MOROKOSHI Sorghum transcriptome database Human Protein Atlas DropViz PmiREN |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2018-02-06 |
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Last update date of this record:
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2020-10-04 |
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Record license:
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Creative Commons CC0 license |