PmiREN: Plant miRNA ENcyclopedia
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| Database maintenance site: | Beijing Agro-Biotechnology Research Center, BAAFS |
| Country/Region: | China |
| Database description: | PmiREN is a comprehensive database for functional plant miRNA in about 180 species phylogenetically ranging from chlorophytes to angiosperms. Each record contains information about organism, miRNA loci (MIRs), secondary structure and sequence, miRNA cluster information, miRNA expression in various tissues, syntenic blocks, predicted target gene with its confidence. Users can browse data with species tree or search using miRNA identifier, keywords, sequences, genomic location, clusters, expression, syntenic blocks, target genes, etc. |
| Organism(s) covered: | , |
| Tag - Target: | Genome/Gene, RNA, Organism |
| Tag - Information type: | Sequence, Expression, Localization |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://www.pmiren.com/download |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | https://www.pmiren.com/contact |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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mirEX SEAweb EVmiRNA liqDB miRTarBase TodoFirGene miRNEST miRBase DropViz PmiRKB |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2021-10-27 |
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Last update date of this record:
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2021-10-27 |
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Record license:
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Creative Commons CC0 license |