Inactive
(Over 14 days)
(Over 14 days)
TMPad: TransMembrane Protein Helix-Packing Database
 ID: | |
| Database name: | |
| Alternative name: | |
| URL: | |
| Database maintenance site: | Bioinformatics Lab., Institute of Information Science, Academia Sinica |
| Country/Region: | Taiwan, Province of China |
| Database description: | The TMPad database contains information on the structural folds in alpha-helical membrane proteins obtained from observing helix-helix interactions experimentally. Additionally, information is provided on the geometric descriptors of these interactions, the accessibility of lipids, topology, ligand and on the observed binding sites. The structures of TM helix-packing and their functions are also organized according to a classification system. This database contains 1107 transmembrane alpha-helical protein entries, 4061 protein chains, 17413 helix-helix interactions and 954 Pubmed links. Search options provided are by PDB identifier, by keyword or by multiple identifiers (advanced). |
| Organism(s) covered: | - |
| Tag - Target: | Protein |
| Tag - Information type: | Sequence, Interaction/Pathway, Image/Movie, 3D structure, Chemical structure |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Inactive |
| Link(s) to Downloadable data: | http://bio-cluster.iis.sinica.edu.tw/TMPad/#tabs-7 |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
|
Link to LSDB Archive:
|
- |
|
Link to MEDALS Database list:
|
- |
|
Link to TogoTV:
|
- |
|
Link to FAIRsharing:
|
- |
|
Similar databases:
|
AffinDB Ig-Base PyDISH MemProtMD BISC DisProt FireDB EncoMPASS Protein-ligand affinity change upon mutation |
|
Record maintainer
|
Integbio Database Catalog |
|
Record source:
|
|
|
Date of creation of this record:
|
2013-06-17 |
|
Last update date of this record:
|
2013-06-17 |
|
Record license:
|
Creative Commons CC0 license |