Closed
International HapMap Project
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| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | NCBI (National Center for Biotechnology Information) |
| Country/Region: | United States |
| Database description: | International HapMap Project is a database of genes associated with human disease and response to pharmaceuticals. It contains genotypes, frequencies, linkage disequilibrium properties, phasing data, allocated SNPs, recombination rates and hotspot, SNP assays, perlegen amplicons, raw data, inferred genotypes and haplogroups of mitochondrial and chrY. Users are able to use the generic Genome Browser to view HapMap Project data in the context of other genomic features, as well as retrieve genotypes and frequencies for specific genomic regions. In this database, many data, software, and documentation have been made publicly available. |
| Organism(s) covered: | |
| Tag - Target: | Genetic variation, Health/Disease |
| Tag - Information type: | Sequence |
| Reference(s) - PubMed ID/DOI: | - |
| Language(s): | Japanese, English |
| Operational status: | Closed |
| Link(s) to Downloadable data: | http://hapmap.ncbi.nlm.nih.gov/downloads/index.html.en |
| Link(s) to Metadata of downloadable data: | http://hapmap.ncbi.nlm.nih.gov/genotypes/00README.txt, http://hapmap.ncbi.nlm.nih.gov/downloads/ld_data/2005-10/00README.TXT, http://hapmap.ncbi.nlm.nih.gov/downloads/samples_individuals/00README.txt, http://hapmap.ncbi.nlm.nih.gov/downloads/xml_docs/ |
| Link(s) to Terms of use: | http://hapmap.ncbi.nlm.nih.gov/guidelines_hapmap_data.html.en |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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- |
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Link to FAIRsharing:
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- |
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Similar databases:
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GDBS (Archive) Database of Genomic Variants RAvariome dbQSNP (Archive) Integrated Cancer Genome Database Cancer Genome Mine DistiLD Database: Diseases and Traits in Linkage Disequilibrium Blocks iJGVD VDJbase TogoVar |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2018-07-16 |
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Record license:
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Creative Commons CC0 license |