Het-PDB Navi: A navigator of small molecules in Protein Data Bank which is called heterogen atoms or in short hetatoms
 ID: | |
| Database name: | |
| Alternative name: | |
| URL: | |
| Database maintenance site: | Nagahama Institute of Bio-Science and Technology (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | Het-PDB Navi is a database of heterogen molecules in the Protein Data Bank (PDB), which act as cofactors for enzymes or stabilizers of proteins. Entries can be surveyed to study their interactions statistically. Searches can be performed based on PDB code, hetero-atom code, protein name or hetero-atom name. Help with the use of the RasMol application is also provided. |
| Organism(s) covered: | - |
| Tag - Target: | Protein, Carbohydrate, Lipid, Metabolite, Chemical compound |
| Tag - Information type: | Interaction/Pathway, 3D structure |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
|
Link to LSDB Archive:
|
- |
|
Link to MEDALS Database list:
|
- |
|
Link to TogoTV:
|
- |
|
Link to FAIRsharing:
|
- |
|
Similar databases:
|
Ligand Expo ChEBI KEGG PATHWAY Database GlycoEpitope NLDB The Cambridge Structural Database 3D Lectin Database iPfam Chemical Component Dictionary Protein-Chemical Structural Interactions |
|
Record maintainer
|
Integbio Database Catalog |
|
Record source:
|
|
|
Date of creation of this record:
|
2013-06-17 |
|
Last update date of this record:
|
2013-06-17 |
|
Record license:
|
Creative Commons CC0 license |