eF-site: electrostatic surface of Functional-site
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| Database maintenance site: | Osaka University Institute for Protein Research (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | eF-site is a database of molecular surfaces and electrostatic potentials for structures in the PDB that allows users to identify active sites and predict molecular recognition mechanisms to infer protein function. The molecular surfaces, with both electrostatic and hydrophobic properties, can be calculated for individual protein subunits, protein complexes, and/or dsDNA in protein-DNA complexes. |
| Organism(s) covered: | - |
| Tag - Target: | Protein |
| Tag - Information type: | Sequence, 3D structure |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://pdbj.org/eF-site/tools.html |
| Link(s) to Metadata of downloadable data: | https://pdbj.org/eF-site/tools.html |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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Sequence Navigator ProMode-Elastic Yorodumi DB-SPIRE (Archive) Statistical Torsional Angles Potentials of NMR Refinement Database Protein Quaternary Structure KnotProt: A database of proteins with knots and slipknots GENIUS II (Archive) InterEvol database : Diving into the structure and evolution of protein complex interfaces PDBSTR |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2019-07-08 |
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Record license:
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Creative Commons CC0 license |