|ProMode-Elastic is a database of normal mode analysis of PDB data using elastic network model in torsional angle space. Normal mode analysis are performed by unique developed program, PDBETA.|
It provides the following information;
1) Fluctuation of atoms and Fluctuation of dihedral angles. Time average and data for the 3 lowest-frequency normal modes are given by graphs.
2) Correlation between fluctuating atoms. Time average and data for the 10 lowest-frequency normal modes are given by a triangle map. Furthermore, a distance map between residues are given by a triangle map.
3) Animation of fluctuating molecules displayed on the viewers, jV (PDBj) and Jmol, for the 10 lowest-frequency normal modes. GIF animation is also available.
4) Displacement vectors exhibited on the viewers, jV (PDBj) and Jmol, for the 10 lowest-frequency normal modes. Moreover, static images for displacement vectors are presented.
In this database, some numerical data are downloadable.