KnotProt: A database of proteins with knots and slipknots: KnotProt
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| Database maintenance site: | University of Warsaw |
| Country/Region: | Poland, Switzerland, United States |
| Database description: | KnotProt collects information about proteins with knots or slipknots. The knotting complexity of proteins is presented in the form of a matrix diagram that shows users the knot type of the entire polypeptide chain and of each of its subchains. The database presents extensive information about the biological function of proteins with non-trivial knotting and enables users to analyze new structures. |
| Organism(s) covered: | |
| Tag - Target: | Protein |
| Tag - Information type: | Sequence, 3D structure |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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https://fairsharing.org/10.25504/FAIRsharing.f5b5j1 |
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Similar databases:
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Protein Classification Benchmark Collection InterEvol database MIPModDB: A Central Resource for the Superfamily of Major Intrinsic Proteins RepeatsDB 3DinSight GENIUS II (Archive) SRPDB MobiDB Statistical Torsional Angles Potentials of NMR Refinement Database DASH |
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Record maintainer
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See the corresponding part in the FAIRsharing record. |
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Record source:
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 (2018-12-21)
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Date of creation of this record:
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2019-03-28 |
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Last update date of this record:
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2020-07-09 |
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Record license:
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Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |