Inactive
(Over 14 days)
(Over 14 days)
Pocketome: an encyclopedia of small-molecule binding sites in 4D: Pocketome
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| Database name: | |
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| Database maintenance site: | The Abagyan Lab UC San Diego, UCSD (University of California San Diego) |
| Country/Region: | United States |
| Database description: | The Pocketome is an encyclopedia of conformational ensembles of druggable binding sites that can be identified experimentally from co-crystal structures in the Protein Data Bank. Each Pocketome entry describes a site on a protein surface that is involved in transient interactions with small molecules and peptides. |
| Organism(s) covered: | |
| Tag - Target: | Protein, Drug |
| Tag - Information type: | Interaction/Pathway, Sequence, 3D structure |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Inactive |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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https://fairsharing.org/10.25504/FAIRsharing.tc6df8 |
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Similar databases:
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BindingDB database of measured binding affinities Protein-ligand affinity change upon mutation dbAMP TargetMine VnD PSCDB 3D interacting domains PiSITE PreDom DB-SPIRE (Archive) |
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Record maintainer
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See the corresponding part in the FAIRsharing record. |
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Record source:
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 (2018-12-21)
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Date of creation of this record:
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2019-03-28 |
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Last update date of this record:
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2020-07-09 |
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Record license:
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Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |