Nucleic Acid Phylogenetic Profile: NAPP
 ID: | |
| Database name: | |
| Alternative name: | |
| URL: | |
| Database maintenance site: | Gautheret Lab, Institute for Integrative Biology of the Cell |
| Country/Region: | France |
| Database description: | NAPP (Nucleic Acids Phylogenetic Profile) enables users to retrieve RNA-rich clusters from any genome in a list of 1000+ sequenced bacterial genomes. RNA-rich clusters can be viewed separately or, alternatively, all tiles from RNA-rich clusters can be contiged into larger elements and retrieved at once as a CSV or GFF file for use in a genome browser or comparison with other predictions/RNA-seq experiments. |
| Organism(s) covered: | , |
| Tag - Target: | RNA |
| Tag - Information type: | Classification, Sequence |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
|
Link to LSDB Archive:
|
- |
|
Link to MEDALS Database list:
|
- |
|
Link to TogoTV:
|
- |
|
Link to FAIRsharing:
|
https://fairsharing.org/10.25504/FAIRsharing.vr52p3 |
|
Similar databases:
|
AREsite Rfam snOPY UMASS Amherst Yeast snoRNA Database Noncoding RNA database Gclust Server COGs RBPDB UCSC GenomeBrowser for Functional RNA worm UTRome |
|
Record maintainer
|
See the corresponding part in the FAIRsharing record. |
|
Record source:
|
 (2018-12-21)
|
|
Date of creation of this record:
|
2019-03-28 |
|
Last update date of this record:
|
2020-07-09 |
|
Record license:
|
Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |