|Kyushu University Graduate School of Medical Sciences , Research Organization of Information and Systems Database Center for Life Science|
|ChIP-Atlas is an integrative database for visualizing and exploiting public ChIP-seq data. This database covers almost all public ChIP-seq data submitted to the SRA (Sequence Read Archives) in NCBI, DDBJ or ENA. ChIP-Atlas is composed of 4 main features;
1) Peak Browser
It graphically visualizes protein bindings on given genomic loci with genome browser (IGV).
2) Target genes
It predicts target genes bound by given transcription factors.
It predicts partner proteins colocalizing with given transcription factors.
4) in silico ChIP
It predicts proteins bound to given genomic loci and genes.
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