OpenProt
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| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | Université de Sherbrooke |
| Country/Region: | Canada |
| Database description: | OpenProt is a database that enforces a polycistronic model of eukaryotic genome annotations. It annotates known proteins (RefProts), novel predicted isoforms (Isoforms) and novel predicted proteins from alternative ORFs (AltProts). It also provides supporting evidence for each protein, such as mass-spectrometry and ribosome profiling detection, protein homology and predictions of funtional domains. Ensembl, NCBI RefSeq and combined Ensembl+RefSeq annotations are available for all species. |
| Organism(s) covered: | , , , , , , , , , |
| Tag - Target: | Protein, Genome/Gene |
| Tag - Information type: | Sequence, Expression |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://openprot.org/p/download |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | https://openprot.org/p/help |
| Contact information of database: | https://openprot.org/p/about |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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- |
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Link to TogoTV:
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- |
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Link to FAIRsharing:
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- |
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Similar databases:
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EpoDB DART CREB Target Gene Database DeinoBase mycoCLAP Newt-omics SEVENS ARTADE2 predicted gene model database AlliumTDB |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2019-11-19 |
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Last update date of this record:
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2019-11-19 |
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Record license:
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Creative Commons CC0 license |