Bactome: bacterial genome database
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| Database maintenance site: | Helmholtz Centre for Infection Research |
| Country/Region: | Germany |
| Database description: | BACTOME provides detailed information on a large collection of clinical Pseudomonas aeruginosa isolates. It includes gene sequence information, transcriptome profiles as well as phenotypic data. The phenotype section comprises hospital-derived data for each clinical isolate with phenotypes such as antibiotic resistance and virulence. The genome section comprises genomic data of all clinical isolates including pangenome and SNP information. The transcriptome section features an interactive gene browser containing the transcriptomes of all isolates. |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, Genetic variation, DNA, RNA, Health/Disease |
| Tag - Information type: | Phenotype, Sequence, Expression, Image/Movie |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | https://bactome.helmholtz-hzi.de/tutorial.html |
| Contact information of database: | https://bactome.helmholtz-hzi.de/cgi-bin/h-impre.cgi |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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Pseudomonas Genome Database V2 ncRNA-eQTL Leiden Open Variation Database Fungal and Oomycete genomics resource Oryza Tag Line Chickpea Portal DisGeNET: a database of gene-disease associations Mouse Phenome Database iDog MiGD |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2019-10-01 |
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Last update date of this record:
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2019-10-01 |
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Record license:
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Creative Commons CC0 license |