TEC database: Transcription Profile of Escherichia coli database
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| Database maintenance site: | National Institute of Genetics (Link to J-Global), TEC group |
| Country/Region: | Japan |
| Database description: | TEC database provides the regulatory targets for all sigma factors and transcription factor (TF)s in E. coli identified by genomic SELEX screening. Users can search either TFs that may regulate specific genes or target genes regulated by TF(s) of specific interest. Then, the results can be filtered by binding intensity and/or location. Users can view both bar chart and heat map of TF binding, and can analyze consensus sequences and download raw data. |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, DNA, Protein, Organism |
| Tag - Information type: | Sequence, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://shigen.nig.ac.jp/ecoli/tec/download/ |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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FlyFactorSurvey YPA PRODORIC Factorbook Transmembrane Helices in Genome Sequences PAZAR DPInteract ReMap Integrated Microbial Genomes Saccharomyces cerevisiae Transcription Factor Database |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2019-01-15 |
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Last update date of this record:
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2019-01-15 |
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Record license:
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Creative Commons CC0 license |