The MGA Data Repository: MGA
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| Database name: | |
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| Database maintenance site: | Ecole Polytechnique Federale de Lausanne, SIB (Swiss Institute of Bioinformatics) |
| Country/Region: | Switzerland |
| Database description: | The Mass Genome Annotation (MGA) Data Repository stores published next generation sequencing data and other genome annotation data (such as gene start sites, SNPs, etc.) that, in conjunction with the ChIP-Seq and SSA servers, can be accessed and studied by scientists. The main characteristic of the MGA database is to store mapped data (in the form of genomic coordinates of mapped reads) and not sequence files. In this way, each sample present in the database has been pre-processed (for example sequence reads has been mapped to a genome) and presented in a standardized text format |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, Genetic variation |
| Tag - Information type: | Sequence, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | - |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | ask-epd[at]googlegroups[dot]com |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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- |
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Link to MEDALS Database list:
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- |
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Link to TogoTV:
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- |
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Link to FAIRsharing:
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https://fairsharing.org/10.25504/FAIRsharing.9997ek |
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Similar databases:
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RNA Binding Protein Variant Database IRView TOHO rSNP DB2 TOHO rSNP DB BGD DBcherry autoSNPdb PigGIS JSNP (Archive) WheatGenome.info |
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Record maintainer
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See the corresponding part in the FAIRsharing record. |
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Record source:
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 (2018-12-21)
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Date of creation of this record:
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2019-03-28 |
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Last update date of this record:
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2024-04-09 |
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Record license:
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Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |