mirDNMR
 ID: | |
| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | Wenzhou Medical University |
| Country/Region: | China |
| Database description: | mirDNMR is a database for the collection of gene-centered background DNMRs obtained from different methods and population variation data. The database has the following functions: (i) browse and search the background DNMRs of each gene predicted by four different methods, including GC content (DNMR-GC), sequence context (DNMR-SC), multiple factors (DNMR-MF) and local DNA methylation level (DNMR-DM); (ii) search variant frequencies in publicly available databases, including ExAC, ESP6500, UK10K, 1000G and dbSNP and (iii) investigate the DNM burden to prioritize candidate genes based on the four background DNMRs using three statistical methods (TADA, Binomial and Poisson test). In conclusion, mirDNMR can be widely used to identify the genetic basis of sporadic genetic diseases. |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, Genetic variation, Organism |
| Tag - Information type: | Sequence, Expression |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
|
Link to LSDB Archive:
|
- |
|
Link to MEDALS Database list:
|
- |
|
Link to TogoTV:
|
- |
|
Link to FAIRsharing:
|
https://fairsharing.org/10.25504/FAIRsharing.68f4xz |
|
Similar databases:
|
Digenic diseases database DBH2H Chickpea Portal TIARA MutDB CADD dbDNV Tree Shrew Database iDog Mouse Phenome Database |
|
Record maintainer
|
See the corresponding part in the FAIRsharing record. |
|
Record source:
|
 (2018-12-21)
|
|
Date of creation of this record:
|
2019-03-28 |
|
Last update date of this record:
|
2020-07-09 |
|
Record license:
|
Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |