Genetic and Genomic Information System: GnpIS
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| Database maintenance site: | ELIXIR, Wellcome Genome Campus, URGI, transplant |
| Country/Region: | France |
| Database description: | GnpIS is a multispecies integrative information system dedicated to plant and fungi pests. It bridges genetic and genomic data, allowing researchers access to both genetic information (e.g. genetic maps, quantitative trait loci, association genetics, markers, polymorphisms, germplasms, phenotypes and genotypes) and genomic data (e.g. genomic sequences, physical maps, genome annotation and expression data) for species of agronomical interest. GnpIS is used by both large international projects and plant science departments at the French National Institute for Agricultural Research. It is regularly improved and released several times per year. GnpIS is accessible through a web portal and allows to browse different types of data either independently through dedicated interfaces or simultaneously using a quick search ('google like search') or advanced search (Biomart, Galaxy, Intermine) tools. |
| Organism(s) covered: | , , , , , , , , , , , , , , , , , , , |
| Tag - Target: | Genome/Gene, Genetic variation |
| Tag - Information type: | Sequence, Expression, Phenotype, Method |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English, French |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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https://fairsharing.org/10.25504/FAIRsharing.dw22y3 |
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Similar databases:
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openSNP Quantitative Trait Loci Archive Japanese Genotype-phenotype Archive Mouse Phenome Database SGN SoyBase Genome Database for Rosaceae GeneNetwork denovo-db DisGeNET |
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Record maintainer
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See the corresponding part in the FAIRsharing record. |
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Record source:
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 (2018-12-21)
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Date of creation of this record:
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2019-03-28 |
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Last update date of this record:
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2024-07-28 |
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Record license:
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Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |