SoyBase
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| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | Iowa State University |
| Country/Region: | United States |
| Database description: | SoyBase, the USDA-ARS soybean genetic database, is a comprehensive repository for professionally curated genetics, genomics and related data resources for soybean. SoyBase contains genetic, physical and genomic sequence maps integrated with qualitative and quantitative traits. The quantitative trait loci (QTL) represent more than 18 years of QTL mapping of more than 90 unique traits. SoyBase also contains the well-annotated 'Williams 82' genomic sequence and associated data mining tools. The genetic and sequence views of the soybean chromosomes and the extensive data on traits and phenotypes are extensively interlinked. This allows entry to the database using almost any kind of available information, such as genetic map symbols, soybean gene names or phenotypic traits. SoyBase is the repository for controlled vocabularies for soybean growth, development and trait terms, which are also linked to the more general plant ontologies. |
| Organism(s) covered: | , |
| Tag - Target: | Organism, Genome/Gene, Genetic variation, DNA, Protein |
| Tag - Information type: | Phenotype, Ontology/Terminology/Nomenclature, Expression, Image/Movie, Interaction/Pathway, Sequence, Method |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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https://fairsharing.org/10.25504/FAIRsharing.z4agsr |
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Similar databases:
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Genome Database for Rosaceae Soybean Knowledge Base (SoyKB) Quantitative Trait Loci Archive Genetic and Genomic Information System BacMap SGN CellFinder openSNP FaceBase GeneNetwork |
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Record maintainer
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See the corresponding part in the FAIRsharing record. |
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Record source:
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 (2018-12-21)
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Date of creation of this record:
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2019-03-28 |
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Last update date of this record:
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2021-11-14 |
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Record license:
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Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |