ToxoDB: ToxoDB
 ID: | |
| Database name: | |
| Alternative name: | |
| URL: | |
| Database maintenance site: | Bioinformatics Resource Centers, National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) |
| Country/Region: | United States |
| Database description: | ToxoDB is a free online resource that provides access to genomic and functional genomic data for Toxoplasma and related organisms. The resource contains over 30 fully sequenced and annotated genomes, with genomic sequence from multiple strains available for variant detection and copy number variation analysis. In addition to genomic sequence data, ToxoDB contains functional genomic datasets including microarray, RNAseq, proteomics, ChIP-seq, and phenotypic data. In addition, results from a number of whole-genome analyses are incorporated, including mapping to orthology clusters, which allows users to leverage phylogenetic relationships in their analyses. |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, Health/Disease, Organism, cDNA/EST |
| Tag - Information type: | Sequence, Expression, Ontology/Terminology/Nomenclature |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
|
Link to LSDB Archive:
|
- |
|
Link to MEDALS Database list:
|
- |
|
Link to TogoTV:
|
- |
|
Link to FAIRsharing:
|
https://fairsharing.org/10.25504/FAIRsharing.a08mtc |
|
Similar databases:
|
TrichDB PlasmoDB TriTrypDB GiardiaDB MicrosporidiaDB CryptoDB Nematode.net AgBase Echinobase AmoebaDB |
|
Record maintainer
|
See the corresponding part in the FAIRsharing record. |
|
Record source:
|
 (2018-12-20)
|
|
Date of creation of this record:
|
2019-03-28 |
|
Last update date of this record:
|
2024-07-24 |
|
Record license:
|
Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |