DBASS
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| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | University of Southampton |
| Country/Region: | United Kingdom |
| Database description: | DBASS is a comprehensive repository of new exon boundaries that were induced by pathogenic mutations in human disease genes. This database consists of two databases, DBASS3 and DBASS5. They provide aberrant 5'- and 3'-splice sites that were activated either by mutations in the consensus sequences of natural exon-intron junctions (cryptic sites) or elsewhere ('de novo' sites). Data in DBASS3 and DBASS5 can be searched by disease phenotype, gene, mutation, location of aberrant splice sites in introns and exons and their distance from authentic counterparts, by bibliographic references and by the splice-site strength estimated with several prediction algorithms. The user is also able to retrieve reference sequences of both aberrant and authentic splice sites with the underlying mutation. |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, Genetic variation, Health/Disease |
| Tag - Information type: | Sequence |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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- |
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Similar databases:
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Catalogue of Transmission Genetics in Arabs ostogenesis imperfecta & Ehlers-Danlos syndrome variant databases Digenic diseases database JFADdb HGVD DistiLD Database: Diseases and Traits in Linkage Disequilibrium Blocks DPV DisGeNET TogoVar Infevers |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2016-08-30 |
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Last update date of this record:
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2016-08-31 |
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Record license:
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Creative Commons CC0 license |