Inactive
(Over 14 days)
(Over 14 days)
TOMATOMICS
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| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | Bioinformatics Laboratory of Meiji University (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | TOMATOMICS is an integrated omics database of Solanum lycopersicum. It contains sequences of all Solanum lycopersicum ESTs, Micro-Tom full-length cDNAs, ITAG2.4 gene models, and SNPs. Sequences are assigned annotation based on the manual curation of published papers and the BLAST search. Users can search genes by keywords, browse data with a genome browser, and use BLAST. It also contains information about gene expression and coexpression. |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, cDNA/EST, Genetic variation |
| Tag - Information type: | Sequence, Expression |
| Reference(s) - PubMed ID/DOI: | - |
| Language(s): | English |
| Operational status: | Inactive |
| Link(s) to Downloadable data: | http://bioinf.mind.meiji.ac.jp/tomatomics/download.php |
| Link(s) to Metadata of downloadable data: | http://bioinf.mind.meiji.ac.jp/tomatomics/download.php |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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- |
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Similar databases:
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Cucurbit Genomics Database PEDE KaTomicsDB UTGB Medaka Genome Browser MiBASE Daphnia Water Flea Genome Database Ghost Database Chickpea Portal Striga hermonthica EST Database cBARBEL |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2016-01-19 |
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Last update date of this record:
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2016-07-07 |
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Record license:
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Creative Commons CC0 license |