Cassava Online Archive
|RIKEN Center for Sustainable Resource Science|
|The Cassava Online Archive is a database about cassava mRNA sequences and ESTs currently available from NCBI (Genbank/EMBL/DDBJ) and their annotations. This database contains annotations based on the similarity search results collated from several protein databases and the similarity map results from the cassava (Manihot esculenta, Euphorbiaceae), castor bean (Ricinus communis, Euphorbiaceae), poplar (Populus trichocarpa, Salicaceae), grape (Vitis vinifera, Vitaceae), and Arabidopsis thaliana (Brassicaceae) genome sequences. It also contains domain organization as predicted by InterProScan and gene Ontology (GO) terms for improving the annotations.
This database allows to search with gene function, accession number, and sequence similarity (BLAST).
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|Genome/Gene, cDNA/EST, Genetic variation|