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Inactive
(9days)

FLJ Human cDNA Database

info ID: NBDC00450
info Database name: FLJ Human cDNA Database
info Alternative name: -
info URL: 
info Database maintenance site: Molecular Profiling Research Center for Drug Discovery, AIST
info Country/Region: Japan
info Database description: FLJ is a sequence analysis database that is focused on mRNA variations of human genome and cDNA sequences. There are about 20 to 25 thousand human genes and 100 thousand mRNA varieties, which are apparently caused by transcription start site (TSS) variations and splicing.
In the previous human cDNA project, approximately 30 thousand FLJ human full-length sequenced cDNAs were deposited in DDBJ/GenBank/EMBL, and approximately 1.4 million of 5'-end sequences (5'-EST) of FLJ full-length cDNAs from approximately 100 kinds of cDNA libraries of human tissues and cells that were constructed by the oligo-capping method were obtained. These FLJ cDNAs included approximately 80% of all human genes. In the project we developed an efficient splicing variant cDNA cloning and evaluation system, obtaining more than a thousand full-length sequenced cDNAs, which we used with the human genome to construct a sequence analysis database focused on mRNA variations.
info Organism(s) covered: Homo sapiens ()
info Tag - Target: cDNA/EST, Genetic variation
info Tag - Information type: Sequence
info Reference(s) - PubMed ID/DOI: 
PubMed ID:
20728443
DOI:
-
PubMed ID:
22140100
DOI:
-
PubMed ID:
20728443
DOI:
-
PubMed ID:
19880432
DOI:
-
PubMed ID:
19073703
DOI:
-
PubMed ID:
19054851
DOI:
-
PubMed ID:
16344560
DOI:
-
PubMed ID:
16303743
DOI:
-
PubMed ID:
14702039
DOI:
-
PubMed ID:
11808872
DOI:
-
PubMed ID:
11853313
DOI:
-
PubMed ID:
11375929
DOI:
-
PubMed ID:
11337467
DOI:
-
PubMed ID:
11700583
DOI:
-
PubMed ID:
10756096
DOI:
-
info Language(s): English
info Operational status: Inactive
info Link(s) to Downloadable data: http://flj.lifesciencedb.jp/top/sys_info/02_about_database/accession_no/download_v032.html,
http://flj.lifesciencedb.jp/top/sys_info/02_about_database/accession_no/download_v031.html,
http://flj.lifesciencedb.jp/top/sys_info/02_about_database/accession_no/download.html
info Link(s) to Metadata of downloadable data: -
info Link(s) to Terms of use: -
info Link(s) to "How to use": -
info Contact information of database: -
info Link(s) to API / SPARQL endpoint -
info Link to LSDB Archive: -
info Link to MEDALS Database list:
info Link to TogoTV: -
info Link to FAIRsharing: -
info Similar databases: PEDE
The database of full-length cDNA and EST sequences of Lotus
rsoy
Full Length cDNA
NEDO database
DBTSS
Soybean Marker Database
Striga hermonthica EST Database
KAIKOcDNA
Budding yeast cDNA sequencing project
info Record maintainer Integbio Database Catalog
info Record source: integbio logo
info Date of creation of this record: 2013-06-17
info Last update date of this record: 2019-05-16
info Record license: Creative Commons CC0 license