ID: | NBDC01099 |
Database name: | RefEx |
Alternative name: | Reference Expression dataset |
URL: | http://refex.dbcls.jp/index.php?lang=en |
Database maintenance site: | DBCLS (Database Center for Life Science, Research Organization of Information and Systems) (Link to J-Global) |
Country/Region: | Japan |
Database description: | RefEx is a reference database of gene expression profiles in normal mammalian tissues. RefEx contains comparative expression data obtained from ESTs, microarray (geneChip), CAGE (Cap Analysis gene Expression) tags and RNA-seq for human, mouse and rat. Users can search for tissue-specific genes from a list of 40 organs, as well as gene names and symbols from lists of gene ontology, gene families and chromosomal regions or by keywords. Search results show gene names, heatmaps on 3D human body images visualizing the relative gene expression values, and corresponding reference datasets. |
Organism(s) covered: | Homo sapiens (9606), Mus musculus (10090), Rattus norvegicus (10116) |
Tag - Target: | cDNA/EST, RNA |
Tag - Information type: | Expression |
Reference(s) - PubMed ID/DOI: | - |
Language(s): | Japanese, English |
Operational status: | Active |
Link(s) to Downloadable data: | http://refex.dbcls.jp/download.php?lang=en |
Link(s) to Metadata of downloadable data: | - |
Link(s) to Terms of use: | http://refex.dbcls.jp/index.php?lang=en |
Link(s) to "How to use": | - |
Contact information of database: | - |
Link(s) to API / SPARQL endpoint | - |