Closed
ProSeg: A database of local structures of protein segments
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| Database name: | |
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| Database maintenance site: | AIST (National Institute of Advanced Industrial Science and Technology) (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | This site contains a comprehensive collection of protein segments that were grouped according to similarities in their three-dimensional structure. These groups, called clusters, can be searched by entering a description of the backbone structure of the segment in question. Three possible methods of identification are provided, namely by input of the PDB ID and specific Chain ID of the segment, by direct input of the dihedral angles of the segment or by entering the appropriate DSSP (Define Secondary Structure of Proteins) symbols of the segment to be placed. |
| Organism(s) covered: | - |
| Tag - Target: | Protein |
| Tag - Information type: | 3D structure, Classification |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Closed |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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http://medals.jp/elist/detail/87.html |
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Link to TogoTV:
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- |
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Link to FAIRsharing:
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- |
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Similar databases:
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MEROPS CATH ProtoNet SCOP2 Evolutionary Trace Server UniLectin ArchDB CluSTr CoDNaS SMART |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2014-12-01 |
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Record license:
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Creative Commons CC0 license |