TIGRFAMs
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| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | JCVI (J. Craig Venter Institute) |
| Country/Region: | United States |
| Database description: | TIGRFAMs is a database of sequence alignments of protein coding sequences in multiple species. The database contains protein families annotated by sequence similarity using an HMM algorithm. Users can search the database and download released data via FTP. |
| Organism(s) covered: | - |
| Tag - Target: | Protein |
| Tag - Information type: | Classification |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | ftp://ftp.jcvi.org/pub/data/TIGRFAMs/ |
| Link(s) to Metadata of downloadable data: | ftp://ftp.jcvi.org/pub/data/TIGRFAMs/RELEASE_NOTE_15.0 |
| Link(s) to Terms of use: | ftp://ftp.jcvi.org/pub/data/TIGRFAMs/COPYRIGHT |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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- |
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Link to MEDALS Database list:
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- |
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Link to TogoTV:
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- |
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Link to FAIRsharing:
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https://fairsharing.org/biodbcore-000403 |
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Similar databases:
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HAMAP database of microbial protein families PROSITE PlantsT The Carbohydrate-Active enZYmes Database MEROPS ProDom gpDB CAMPSign Pfam InterPro |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2013-06-17 |
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Record license:
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Creative Commons CC0 license |