PROSITE: Database of protein domains, families and functional sites
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| Database maintenance site: | SIB (Swiss Institute of Bioinformatics) |
| Country/Region: | Switzerland |
| Database description: | ExPASy PROSITE is a database of protein domains, protein families and their functional sites. This repository also provides profiles and associated patterns, which can be used to identify the above. This version (20.91) was made available on 4 March 2013. It contains 1,661 documentation entries, 1,053 profiles and 1,308 patterns. The database can be searched by entering a document number, a ProRule description, a taxonomic series or by calling up a page, whereupon the proteins are listed according to the number of positive UniProtKB hits, from most to least. The option is also provided to have a sequence scanned against PROSITE patterns and profiles. In the Advanced search option that is available, additional criteria may be added when a scan request is entered to specify the results more accurately. |
| Organism(s) covered: | - |
| Tag - Target: | Protein |
| Tag - Information type: | Sequence, Classification |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | ftp://ftp.expasy.org/databases/prosite/ |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | http://prosite.expasy.org/prosite_license.html |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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https://fairsharing.org/biodbcore-000527 |
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Similar databases:
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InterPro TIGRFAMs HAMAP database of microbial protein families PANDIT COGs ProDom PlantsT CyanoClust database Gclust Server Pfam |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2013-06-17 |
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Record license:
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Creative Commons CC0 license |