Inactive
(Over 14 days)
(Over 14 days)
H-DBAS: Human-transcriptome DataBase for Alternative Splicing
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| Database name: | |
| Alternative name: | |
| URL: | |
| Database maintenance site: | AIST (National Institute of Advanced Industrial Science and Technology) (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | H-DBAS is the Human-transcriptome DataBase for Alternative Splicing, and is based on H-InvDB. Features of H-DBAS include annotated information of genome-wide human AS variants. Representative AS variants (RASVs) were identified from data of 6 model mammals, namely, human, mouse, rat, chimpanzee, macaque and dog, and are provided as full-length cDNA data sets, mRNA data sets and RNA data sets. Equally-spliced variants between these mammals were identified and compared sets are available. Splice sites and motifs that affect SNPs in humans, RASVs that affect protein function in humans and AS junctions tedetced by RNA-Sez tags are provided. |
| Organism(s) covered: | , , , , , |
| Tag - Target: | cDNA/EST, RNA |
| Tag - Information type: | Sequence |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | Japanese, English |
| Operational status: | Inactive |
| Link(s) to Downloadable data: | http://h-invitational.jp/h-dbas/download.jsp?lang=en |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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- |
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Link to MEDALS Database list:
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http://medals.jp/elist/detail/7.html |
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Link to TogoTV:
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- |
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Link to FAIRsharing:
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https://fairsharing.org/biodbcore-000241 |
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Similar databases:
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TassDB2 H-InvDB ASSETs SpliceInfo KONAGAbase ASPicDB ASTRA (Archive) PMPj-Blast OryzaPG-DB |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2013-06-17 |
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Record license:
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Creative Commons CC0 license |