FANTOM4: Functional Annotation of the Mammalian Genome 4
 ID: | |
| Database name: | |
| Alternative name: | |
| URL: | |
| Database maintenance site: | RIKEN Omics Science Center (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | FANTOM is a database about functional annotations of the Mammalian genomes. It contains experimental data of the FANTOM consortium which is an international collaborative research project initiated and organized by the RIKEN Omics Science Center. This database includes CAGE tags, mapping, and promoters (clusters or aggregations of CAGE tags as units of promoter) for human and mouse, and information about the experiments and data processing. Users are able to use genome browser or EDGE express DB which is designed for integrating and interpreting large high-throughput expression datasets in the context of biological networks. |
| Organism(s) covered: | |
| Tag - Target: | cDNA/EST, DNA, RNA, Protein |
| Tag - Information type: | Sequence, Expression, Interaction/Pathway, Image/Movie |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | Japanese, English |
| Operational status: | Active |
| Link(s) to Downloadable data: | http://fantom.gsc.riken.jp/4/download/ |
| Link(s) to Metadata of downloadable data: | http://fantom.gsc.riken.jp/4/download/ |
| Link(s) to Terms of use: | http://fantom.gsc.riken.jp/4/download/ |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
|
Link to LSDB Archive:
|
https://dbarchive.biosciencedbc.jp/jp/fantom4/desc.html |
|
Link to MEDALS Database list:
|
- |
|
Link to TogoTV:
|
|
|
Link to FAIRsharing:
|
- |
|
Similar databases:
|
FANTOM5 FANTOM6 The Diatom EST Database FANTOM3 VISTA Enhancer Browser IRESite BioCyc Araport WHO/TDR MALARIA Database CGAP |
|
Record maintainer
|
Integbio Database Catalog |
|
Record source:
|
|
|
Date of creation of this record:
|
2013-06-17 |
|
Last update date of this record:
|
2022-01-16 |
|
Record license:
|
Creative Commons CC0 license |