Conserved Domains and Protein Classification
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| Database name: | |
| Alternative name: | - |
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| Database maintenance site: | NCBI (National Center for Biotechnology Information) |
| Country/Region: | United States |
| Database description: | This site contains annotations and tools for protein domain structures. It is comprised of: (1) Conserved Domain Database (CDD), which contains information on well-annotated multiple sequence alignment models for ancient domains and full-length proteins, (2) CD-Search and Batch CD-Search for search domains in the Conserved Domain Database (CDD) and conserved domains on multiple protein sequences respectively, (3) Subfamily Protein Architecture Labeling Engine (SPARCLE), which is a resource of the functional characterization of protein sequences, (4) Conserved Domain Architecture Retrieval Tool (CDART) for search protein similarities based on domain architecture,r and (5) CDTree for a helper application. |
| Organism(s) covered: | - |
| Tag - Target: | Protein |
| Tag - Information type: | Image/Movie, Classification |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/ |
| Link(s) to Metadata of downloadable data: | ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/README |
| Link(s) to Terms of use: | https://www.ncbi.nlm.nih.gov/home/about/policies.shtml |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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- |
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Link to FAIRsharing:
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https://fairsharing.org/biodbcore-000433 |
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Similar databases:
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HAMAP database of microbial protein families PoSSuM CDD COGs MnM SALAD Database Blocks CluSTr Protein Cluster PlantsT |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2013-06-17 |
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Record license:
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Creative Commons CC0 license |