ODB: Operon DataBase
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| Database maintenance site: | Niigata University Graduate School of Medical and Dental Sciences (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | All known operons from numerous species have been collected from literature and other public databases in this database, which also includes a system to predict operons by user definitions. Operon candidates are provided based on logic operations of the following parameters: intergenic distance, intergenic step, pathway, co-expression, and ortholog. Prediction accuracy can also be obtained. |
| Organism(s) covered: | - |
| Tag - Target: | Genome/Gene |
| Tag - Information type: | Expression, Interaction/Pathway, Classification |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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RegulonDB Prokaryotic Operon DataBase A Systematic Annotation Package Saccharomyces cerevisiae Transcription Factor Database KEGG ORTHOLOGY (KO) Database cis-Regulatory Element Database GermOnline Open Regulatory Annotation ALCOdb PODC |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2014-04-21 |
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Record license:
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Creative Commons CC0 license |