Codon Usage Database
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| Alternative name: | - |
| URL: | |
| Database maintenance site: | Kazusa DNA Research Institute (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | The Codon Usage Database is an extended web-based version of CUTG (Codon Usage Tabulated from GenBank) and is used for exploration of codon usage within various organisms, chloroplast, and mitochondria. The database captures data from the NCBI-GenBank for 3,027,973 complete protein coding genes from 35,799 organisms. Users can search the database by organism with data expressed in tabular form: codon, frequency per 1000, number. In addition, the table can be modified to include the amino acid encoded by the codon. |
| Organism(s) covered: | , , |
| Tag - Target: | Genome/Gene, RNA |
| Tag - Information type: | Sequence |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | ftp://ftp.kazusa.or.jp/pub/codon/current/ |
| Link(s) to Metadata of downloadable data: | ftp://ftp.kazusa.or.jp/pub/codon/current/README |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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tRNADB-CE Codon Table Komugi GSP Extremobase GenomeAtlasDatabase UCSC GenomeBrowser for Functional RNA Genome Project of Streptomyces avermitilis The European ribosomal RNA Database Noncoding RNA database Streptococcus pyogenes |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2015-07-09 |
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Record license:
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Creative Commons CC0 license |